Modules Update December 2021¶
Since the last module update in December 2019, we have:
- added/moved 48 modules to production
- added 20 modules to the development environment
- deprecated 12 modules
- deleted 4 modules
The following 48 module files have been added or moved to production:
| Application Name | Application Version | Arch | Set as Default? |
|---|---|---|---|
| abaqus | 2020 | x86_64 | yes |
| ansys | 2019R3 | x86_64 | no |
| ansys | 2021R2 | x86_64 | yes |
| bcftools | 1.13 | x86_64 | yes |
| blast+ | 2.11.0 | x86_64 | no |
| cellranger | 5.0.1 | x86_64 | no |
| cellranger | 6.0.1 | x86_64 | no |
| cellranger | 6.0.2 | x86_64 | yes |
| cellranger-arc | 2.0.0 | x86_64 | yes |
| cellranger-atac | 2.0.0 | x86_64 | yes |
| cst_studio | 2019 | x86_64 | yes |
| cuda | 11.0.3 | x86_64 | no |
| cuda | 11.2.2 | x86_64 | no |
| cudnn | 8.0-cuda11 | x86_64 | no |
| cudnn | 8.1.1-cuda11 | x86_64 | no |
| cudnn | 8.1.1-cuda11.2 | x86_64 | no |
| fgsl | 1.3.0 | x86_64 | yes |
| flye | 2.8.3 | x86_64 | no |
| ga | 5.7.0 | x86_64 | yes |
| gatk | 4.2.1.0 | x86_64 | yes |
| gdb | 11.1 | x86_64 | yes |
| git | 2.34.1 | x86_64 | yes |
| jags | 4.3.0 | x86_64 | yes |
| java | 17.0.0 | x86_64 | yes |
| julia | 1.6.0 | x86_64 | yes |
| kraken | 2.1.1 | x86_64 | no |
| lapack | 3.9.0 | x86_64 | yes |
| mafft | 7.480 | x86_64 | yes |
| maple | 2020 | x86_64 | no |
| maple | 2021 | x86_64 | yes |
| mathematica | 12.2.0 | x86_64 | no |
| mathematica | 12.3.1 | x86_64 | yes |
| matlab | 2021a | x86_64 | yes |
| nextflow | 20.10.0 | x86_64 | yes |
| nvidia-hpc-sdk | 21.3 | x86_64 | yes |
| openfoam | 2106 | x86_64 | yes |
| phyx | 1.1 | x86_64 | yes |
| qiime2 | 2021.11 | x86_64 | yes |
| R | 4.1.1 | x86_64 | yes |
| raxml-ng | 0.9.0 | x86_64 | yes |
| spaceranger | 1.2.1 | x86_64 | no |
| spaceranger | 1.3.1 | x86_64 | yes |
| sratools | 2.10.8 | x86_64 | yes |
| star | 2.7.9a | x86_64 | yes |
| starccm | 2020.1.1-R8 | x86_64 | no |
| starccm | 2021.2.1-R8 | x86_64 | yes |
| vasp | 6.1.1_vaspsol | x86_64 | no |
| vulkan-sdk | 1.2.176.1 | x86_64 | yes |
The following 20 module files have been added to the development environment:
| Application Name | Application Version | Arch |
|---|---|---|
| anaconda3 | 2021.11 | x86_64 |
| bats | 1.3.0 | x86_64 |
| bcl2fastq2 | 2.20.0 | x86_64 |
| cst_studio | 2021 | x86_64 |
| cuda | 11.3.1 | x86_64 |
| fsl | 6.0.4 | x86_64 |
| gcc | 11.2.0 | x86_64 |
| gsutil | 5.4 | x86_64 |
| kraken | 2.1.2 | x86_64 |
| latex | 3.14 | x86_64 |
| mono | 6.12.0 | x86_64 |
| mplus | 8.7 | x86_64 |
| openbugs | 3.2.3 | x86_64 |
| openfoam | 8 | x86_64 |
| paraview | 5.9.1 | x86_64 |
| pigz | 2.6 | x86_64 |
| qupath | 0.2.3 | x86_64 |
| sqlite | 3.36.0 | x86_64 |
| vtst | 6.1.1 | x86_64 |
| zstd | 1.5.0 | x86_64 |
The following 12 module files have been deprecated:
| Application Name | Application Version | Arch |
|---|---|---|
| cellranger | 2.2.0 | x86_64 |
| cellranger | 3.0.2 | x86_64 |
| cellranger | 3.1.0 | x86_64 |
| cellranger | 4.0.0 | x86_64 |
| cellranger | 5.0.0 | x86_64 |
| gdb | 7.12 | x86_64 |
| git | 2.25.0 | x86_64 |
| git | 2.26.2 | x86_64 |
| gurobi | 9.1.2 | x86_64 |
| julia | 0.5.2 | x86_64 |
| paraview | 5.3.0 | x86_64 |
| seqlinkage | 1.1.0 | x86_64 |
The following 4 module files have been deleted:
| Application Name | Application Version | Arch |
|---|---|---|
| git | 2.12.0 | x86_64 |
| git | 2.19.0 | x86_64 |
| nvidia-hpc-sdk | 20.7 | x86_64 |
| singularity | all | x86_64 |